Uamx

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Specifically, we assessed its ability to metabolize various carbon sources, its resistance to low pH exposure, and its growth in the presence of bile salts. The genomic and bioinformatic analyses included the prediction of gene and protein metabolic functions, a pan-genome and phylogenomic analysis. Moreover, it showed the ability to metabolize simple and complex carbon sources glucose, starch, carboxymethyl-cellulose, inulin, and tributyrin , showing a differentiated electrophoretic profile. Genome was assembled into a single contig, with a high percentage of genes and proteins associated with the metabolism of amino acids, carbohydrates, and lipids. Antibiotic resistance genes were detected, but only one beta-Lactam resistance protein related to the inhibition of peptidoglycan biosynthesis was identified. Therefore, BP-UAMX seems to be adapted to the intestinal environment, with physiological and genomic analyses demonstrating the ability to metabolize complex carbon sources, the strain has an open pan-genome with continuous evolution and adaptation.

Uamx

Federal government websites often end in. The site is secure. Preview improvements coming to the PMC website in October Learn More or Try it out now. San Rafael Atlixco , Col. Specifically, we assessed its ability to metabolize various carbon sources, its resistance to low pH exposure, and its growth in the presence of bile salts. The genomic and bioinformatic analyses included the prediction of gene and protein metabolic functions, a pan-genome and phylogenomic analysis. Moreover, it showed the ability to metabolize simple and complex carbon sources glucose, starch, carboxymethyl-cellulose, inulin, and tributyrin , showing a differentiated electrophoretic profile. Genome was assembled into a single contig, with a high percentage of genes and proteins associated with the metabolism of amino acids, carbohydrates, and lipids. Antibiotic resistance genes were detected, but only one beta-Lactam resistance protein related to the inhibition of peptidoglycan biosynthesis was identified.

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Uamx

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For instance, Bacillus cereus is capable of integrating exogenous free fatty acids into the cell membrane as an adaptation response to low temperatures and anaerobiosis. The COG database: New developments in phylogenetic classification of proteins from complete genomes. Red 5E Therefore, the pan-genome analysis can estimate the number of additional complete genome sequences that are required to characterize the entire genomic diversity [ 36 , 37 , 38 ]. The electrophoretic profiles were mainly composed of protein bands with a molecular weight lower than Blue DD9. Mukhopadhya I. Finally, the assembled genome was analyzed using the NCBI database. Nannan C. Secondary metabolites biosynthesis, transport, and catabolism.

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Their survival depends on the availability of specific carbon sources provided by the diet of the individual and on the activity of the various enzymes that are present in saliva and throughout the GIT. Speaking for Speak! FEBS Lett. Received Apr 16; Accepted May PacBio Sequencing and Its Applications. Trends Genet. Popular Tools Adobe Photoshop. However, an unbalance in the GUT microbial population has been related to the development of obesity, diabetes, and liver diseases, derived from the monosaccharides and FA within the GIT that provides additionally energy to the host, and the increased intestinal permeability due to the production lipopolysaccharides in response to the consumption of high-fat diets [ 22 , 23 ]. Dartois V. However, in vitro studies are fully reproducible, rapid, less expensive, and do not involve ethical restrictions.